Changes for page Working with HDC Datasets

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25	25	Datasets are created from the Main Menu. To create a new dataset,
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30	30	1. Click **Datasets** from the Main Menu to open the Datasets landing page. Datasets you previously created are displayed in this page in the “My Datasets” tab, and you can continue working on them as described in the following sections of this article, e.g. see //Adding Files to a Dataset//.
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53	53	To add files to a Dataset,
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57	57	1. Navigate your Project’s File Explorer and click **Core**.
58	58	1. Select one or more files and/or folders by clicking the checkbox beside each one, then click **Add to Datasets** in the File Explorer menu.
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71	71	Use the **Explorer** tab to organize and validate your Dataset.
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75	75	1. Open the Dataset from the Datasets landing page, then select the **Explorer **tab.
76	76	1. Use **+ New Folder** or **Move to **to rearrange files and/or folders.
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90	90	=== BIDS Validation ===
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94	94	The **Validate BIDS** tool allows you to check your Dataset for conformation with the [[Brain Imaging Data Structure (BIDS)>>url:https://bids.neuroimaging.io/specification.html]] standard. The tool uses the open-source [[bids-validator 1.8.4 Python Package>>url:https://pypi.org/project/bids-validator/#quickstart]].
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96	96	Before running the Validate BIDS tool, ensure that the Dataset Type is set to BIDS (defined at Dataset creation or modified in the **Metadata **tab under Schemas > Essential).
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100	100	1. Open the Dataset from the Datasets landing page and select the **Explorer **tab.
101	101	1. Click **Validate BIDS**. If the Validate BIDS button isn’t visible, make sure your Dataset Type is set to BIDS (see above).
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126	126	Use the **Metadata** tab to annotate your Dataset.
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130	130	These steps describe how to annotate your dataset using the Default Schema. If you have created a Custom Schema (see the section titled //Creating a Custom Schema// in this article), you can follow the same steps described here, selecting your Custom Schema name instead of Default Schema in Step 2.
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134	134	1. (((
135	135	In the **Schemas **section on the right panel, click the **Select schema to complete **dropdown menu and select one of the Default schema templates or a Custom Schema created by you (see the section //Creating a Custom Schema //in this article).
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139	139	Default schema categories include the following:
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171	171	To create a Custom Schema,
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175	175	1. Open the Dataset from the Datasets landing page and select the **Metadata **tab. Under **Existing Schema** (left panel), select **Default Schemas**.
176	176	1. In the **Schemas **panel (right side), click the **Select schema to complete **dropdown menu and select **+ Create Custom Schema** to open the Custom Schema Template creation window.
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200	200	To manage a Custom Schema template that contains saved annotations,
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204	204	1. Navigate to **Existing Schema**// //(left panel of the **Metadata **tab) and select the **Default Schema** category.
205	205	1. Click the Custom schema name, then click the **eye icon** to open the Schemas view (right side). The existing entries are displayed.
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216	216	== Annotating with OpenMINDS ==
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220	220	The **open** **M**etadata **I**nitiative for **N**euroscience **D**ata **S**tructures ([[openMINDS>>url:https://github.com/HumanBrainProject/openMINDS]])// //is an open-source, community-driven research infrastructure initiative powered by EBRAINS and the Human Brain Project. The openMINDS schema gathers a set of metadata models that can be used for describing heterogeneous neuroscience data. The data can originate from human, animal or simulated studies, computational models, and software tools, as well as metadata or data models.
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224	224	Community tools are offered to help generate openMINDS JSON schemas, including a [[wizard>>url:https://wizard.kg-ppd.ebrains.eu/]] and a [[python package>>url:https://pypi.org/project/openMINDS/]]. For information or support, please contact the [[openMINDS team>>url:https://github.com/HumanBrainProject/openMINDS]].
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228	228	To upload an openMINDS JSON schema file,
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245	245	To view Activity, open the Dataset from the Datasets landing page and select the **Activity **tab. Use the date filters to narrow the range of activities displayed.
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250	250	== Anytime Dataset Download ==
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260	260	To release a Dataset version,
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265	265	1. Open the Dataset from the **Datasets **landing page and ensure you have made all the desired updates to the files, folder structure and metadata.
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274	274	To view all released Dataset versions, click **Versions **in the Dataset information bar located next to the Dataset title. This opens the **Versions **sidebar where you can browse and download the Versions you have created.
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