Changes for page Working with HDC Datasets

Last modified by Dennis Segebarth on 2024/10/02 18:25

From version 1.9
edited by Susan Evans
on 2023/07/11 14:57
Change comment: (Autosaved)
To version 6.1
edited by Dennis Segebarth
on 2023/09/13 18:13
Change comment: There is no comment for this version

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1 -XWiki.sgevans
1 +XWiki.dsegebarth
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32 32  Note: this information is stored in the Dataset’s Essential schema and is visible in the Dataset Home tab, and can be changed later (with the exception of Dataset Code) - see //Reviewing and Editing Metadata Annotations//. Mandatory fields are denoted by a red asterisk ( * ).
33 33  11. Define Dataset
34 34  11*. //Title//*: A short title for the Dataset (max. 100 characters). This entry can be changed later.
35 -11*. //Dataset Code//*: A distinct, immutable code defined by you to uniquely identify your Dataset. This entry cannot be changed later.
35 +11*. //Dataset Code//*: A distinct, immutable code defined by you to uniquely identify your Dataset. This entry __cannot__ be changed later.
36 36  11*. //Authors//*: One or more authors. Hit **Enter** after each entry. These entries can be changed later.
37 37  11*. //Dataset Type//: Use the default **GENERAL** or, if your Dataset uses the Brain Imaging Data Structure (BIDS) standard and you wish to use the built-in BIDS validation tool, select **BIDS** from the dropdown menu. This entry can be changed later.
38 38  11. Description:
39 39  11*. //Dataset Description//*: A longer description of the dataset. Please remember to comply with the Platform Terms of Use, Privacy Policy, and do not enter sensitive personal information in this field.
40 -11*. //Modality//: Based on the Human Brain Project OpenMINDS standard.
41 -11*. //Collection Method//: Based on the Human Brain Project OpenMINDS standard.
40 +11*. //Modality//: Based on the Human Brain Project [[OpenMINDS>>http://github.com/HumanBrainProject/openMINDS]] standard.
41 +11*. //Collection Method//: Based on the Human Brain Project [[OpenMINDS>>http://github.com/HumanBrainProject/openMINDS]] standard.
42 42  11*. //License//: License under which you want to share your Dataset (e.g., Creative Commons). A License is not required, yet highly recommended if you want to share your Dataset in compliance with the FAIR criteria.
43 43  11*. //Tags//: Custom keywords you create for your Dataset. Tags are displayed on the Datasets landing page and information bar.
44 44  1. When you provided all required information, click Create in the upper right-hand corner to complete the Dataset creation.
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64 64  
65 65  = Organizing and Validating Datasets =
66 66  
67 -After copying Project files into a Dataset, you can perform a variety of tasks including moving, previewing, renaming or deleting files and folders, and validating the file structure against a supported external specification (currently, the [[Brain Imaging Data Structure (BIDS)>>url:https://bids.neuroimaging.io/specification.html]] standard is supported). You can also add metadata (see //Annotating Datasets with Metadata//).
67 +After copying Project files into a Dataset, you can perform a variety of tasks including moving, previewing, renaming or deleting files and folders, and validating the file structure against a supported external specification (currently, the [[Brain Imaging Data Structure (BIDS)>>url:https://bids.neuroimaging.io/specification.html]] standard is supported). You can also add metadata (see //Annotating Datasets with Metadata//) and share these with members of your Project by first creating a Space in the [[EBRAINS Knowledge Graph>>url:https://docs.kg.ebrains.eu/]], and then uploading the metadata to it (see //Interacting with the EBRAINS Knowledge Graph//).
68 68  
69 69  == Organizing Datasets ==
70 70  
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157 157  
158 158  1. Navigate to **Existing Schema**// //(left panel of the Metadata tab) and select the **Default Schemas** category.
159 159  1. Click the schema name, then click the eye icon to open the Schemas view (right side). The existing entries are displayed in the **Schemas **panel at the right side.
160 -1. (((
161 -To edit the entries, click **Edit** and make the changes, and.
160 +1. To edit the entries, click **Edit** and make the changes, and
161 +1*. **X Reset** to return all entries to their original values.
162 +1*. **Cancel **to exit without saving changes.
163 +1*. **Update** to save the changes and return to the schema view.
162 162  
163 -1. **X Reset** to return all entries to their original values.
164 -1. **Cancel **to exit without saving changes.
165 -1. **Update** to save the changes and return to the schema view.
166 -)))
167 -
168 168  Any new changes are reflected in the Schemas view.
169 169  
170 170  == Creating a Custom Schema template ==
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207 207  1. Navigate to **Existing Schema**// //(left panel of the **Metadata **tab) and select the **Default Schema** category.
208 208  1. Click the Custom schema name, then click the **eye icon** to open the Schemas view (right side). The existing entries are displayed.
209 209  1. Click **Manage Template**.
210 -1. (((
211 -Make your desired edits. The following changes are possible:
212 -
213 -1. Add new fields
214 -1. Delete existing fields
215 -1. Change an existing field from required to optional
216 -)))
207 +1. Make your desired edits. The following changes are possible:
208 +1*. Add new fields
209 +1*. Delete existing fields
210 +1*. Change an existing field from required to optional
217 217  1. Give the updated Schema template a new name, e.g., {name} version 2.
218 218  1. Click **+ Create New Template**.
219 219  
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283 283  
284 284  ----
285 285  
286 -Copyright © 2023 [[Indoc Research>>url:https://www.indocresearch.org/]].
280 +Copyright © 2023 [[Indoc Systems>>url:https://www.indocsystems.com]].
287 287  
288 -HealthDataCloud is powered by Pilot technology, a product of [[Indoc Research>>url:https://www.indocresearch.org/]].
282 +HealthDataCloud is powered by Pilot technology, a product of [[Indoc Systems>>url:https://www.indocsystems.com]].
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